The COL5A1 gene homepage

Ehlers Danlos Syndrome Variant Database


General information
Gene symbol COL5A1
Gene name collagen type V alpha 1 chain
Chromosome 9
Chromosomal band q34.3
Imprinted Unknown
Genomic reference NG_008030.1
Transcript reference NM_000093.4, NM_001278074.1
Exon/intron information NM_000093.4 exon/intron table
Associated with diseases EDS, EDSCL1
Citation reference(s) -
Refseq URL Genomic reference sequence
Curators (1) Raymond Dalgleish
Total number of public variants reported 847
Unique public DNA variants reported 627
Individuals with public variants 505
Hidden variants 15
Download all this gene's data Download all data
Notes Establishment of the database was supported by the European Community's Seventh Framework Programme (FP7/2007-2013) under grant agreement No 200754 - the GEN2PHEN project.
Date created October 06, 2009
Date last updated February 26, 2024
Version COL5A1:240226

Graphical displays and utilities
Graphs Graphs displaying summary information of all variants in the database »
Reading frame checker The Reading-frame checker generates a prediction of the effect of whole-exon changes. Active for: NM_000093.4.
UCSC Genome Browser Show variants in the UCSC Genome Browser (full view, compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (full view, compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
Homepage URL https://www.LOVD.nl/COL5A1
External URL GeneTests
HGNC 2209
Entrez Gene 1289
PubMed articles COL5A1
OMIM - Gene 120215
OMIM - Diseases EDSCL1 (Ehlers-Danlos, classic syndrome, type 1 (EDSCL1 EDS1))
HGMD COL5A1
GeneCards COL5A1
GeneTests COL5A1
Orphanet COL5A1


Active transcripts


ID     

Chr     

Name     

NCBI ID     

NCBI Protein ID     

DescendingVariants     
00024134 9 transcript variant 1 NM_000093.4 NP_000084.3 846
00025528 9 transcript variant 2 NM_001278074.1 NP_001265003.1 450


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