Flyspray:: Thu, 06 May 2010 09:11:30 +0200 Flyspray::LOVD: Recently opened tasks http://www.lovd.nl/bugs/ FS#46: Variant checking to avoid duplicates Raymond Dalgleish Mon, 29 Mar 2010 12:10:59 +0200
Note from developers: This is about a bug in LOVD, where when adding a variant that is already in the database to an existing patient, LOVD does not check in the correct way if the variant already exists and may report that the variant already exists for the patient, while it does not.]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=46 http://www.lovd.nl/bugs/index.php?do=details&task_id=46
FS#45: Bug with Firefox/Camino (Gecko engine) at login Maxime Vallée Mon, 26 Oct 2009 11:05:48 +0100
When Safari is used, it goes well.

Is my installation bad? Because I am pretty sure that your high quality tool works with free browsers world, so have you ever heard about that problem?]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=45 http://www.lovd.nl/bugs/index.php?do=details&task_id=45
FS#44: Reference Sequence Parser 2.8 cannot overwrite old files Raymond Dalgleish Mon, 28 Sep 2009 12:04:11 +0200
I had selected the option of "overwrite it" to allow the old files to be overwritten if they existed, but the script was unable to do so because the permissions on the files (-rw-r--r--) did not allow it. Deleting each of the old files did then allow the script to create the new files.

Perhaps the script should create the files with the permissions -rw-rw-rw- to allow old files to be overwritten.]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=44 http://www.lovd.nl/bugs/index.php?do=details&task_id=44
FS#43: Search problem using Internet Explorer 7 Ivo F.A.C. Fokkema Mon, 21 Sep 2009 17:20:25 +0200
If I type a query string into any of the search boxes that are displayed when the "Search unique variants" button is pressed on the "Variants" tab, the query is not executed when I press the Return key and the Windows "Default Beep" sound is played. A click with the mouse then activates the search and the expected results are returned. The same happens for "Full database search".

I have confirmed this behaviour on another computer which is also running Windows XP and IE7. My computer is running SP2 and the other may be running SP3.

There are no problems with Firefox.]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=43 http://www.lovd.nl/bugs/index.php?do=details&task_id=43
FS#42: Confirmation of ethical consent Raymond Dalgleish Thu, 11 Jun 2009 17:38:42 +0200 http://www.lovd.nl/bugs/index.php?do=details&task_id=42 http://www.lovd.nl/bugs/index.php?do=details&task_id=42 FS#41: Variant colums for dbSNP amd OMIM Raymond Dalgleish Fri, 17 Apr 2009 16:12:36 +0200
It would be useful to have decicated dbSNP and OMIM columns associated with Variants. The input fields would only require appropriate DBSNP or OMIM numbers to be inserted; nothing else.

I guess that I could create custom Variant columns myself and then make the dbSNP and OMIM links active in these columns. However, that\'s an untidy solution that perhaps might have unwanted consequences for data exchange. A field containg only a dbSNP rs number is easier to exchange that one that contains code for a link.]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=41 http://www.lovd.nl/bugs/index.php?do=details&task_id=41
FS#40: Adding variants in different genes to a patient Raymond Dalgleish Fri, 13 Feb 2009 15:08:42 +0100
The ideal solution would be the ability to change gene, as necessary, for each additional variant to be recorded for a patient. Alternatively, there should be the ability to look-up the patient.]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=40 http://www.lovd.nl/bugs/index.php?do=details&task_id=40
FS#39: Button to enter \"First ID free:\" Raymond Dalgleish Fri, 13 Feb 2009 14:52:05 +0100 http://www.lovd.nl/bugs/index.php?do=details&task_id=39 http://www.lovd.nl/bugs/index.php?do=details&task_id=39 FS#38: LOVD is not detecting the user IP address correctly Ammar Husami Thu, 30 Oct 2008 21:42:01 +0100 ]]> http://www.lovd.nl/bugs/index.php?do=details&task_id=38 http://www.lovd.nl/bugs/index.php?do=details&task_id=38 FS#37: allow for more flexible socket configuration settings Ammar Husami Wed, 15 Oct 2008 17:54:08 +0200
refer to out notes at
http://bmi.cchmc.org/resources/software/lovd/overview/?searchterm=lovd

If you add this change to next version, we don\'t have to change it every time we do an update.

Thank you]]>
http://www.lovd.nl/bugs/index.php?do=details&task_id=37 http://www.lovd.nl/bugs/index.php?do=details&task_id=37