LOVD 2.0

Welcome to the LOVD 2.0 bug tracking system. Please note that this bug tracking system is not for LOVD 3.0!

If you have any issues, please read the documentation and Frequently Asked Questions.
Please note that you need to register before you can submit bugs or feature requests.

Information By default, all closed tasks are hidden from view.
Click here to see all tasks.

Tasklist

FS#47 - Monitor reference sequence version numbers

Attached to Project: LOVD 2.0
Opened by Raymond Dalgleish (rwmd) - Wednesday, 06 April 2011, 15:08 GMT+2
Task Type Feature Request
Category Backend / Core
Status Assigned
Assigned To Ivo F.A.C. Fokkema (ifokkema)
Operating System All
Severity Low
Priority Normal
Reported Version 2.0-31
Due in Version Undecided
Due Date Undecided
Percent Complete 0%
Votes 0
Private No

Details

The Mutalyzer plugin for LOVD stopped working for the PLOD1 gene in one of my installations. The error message related to the transcript not being found. The underlying cause was that the RefSeq mRNA record had been updated from NM_000302.2 to NM_000302.3 and this no longer matched with the RefSeqGene record for the gene. It was simple to fix once I realised what had happened.

Could a feature be added to LOVD to track changes in reference sequence version numbers and inform the database manager?

Thanks.
This task depends upon

Loading...