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LOVD v.3.0 - Leiden Open Variation Database
Online gene-centered collection and display of DNA variants
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LOVD 3.0 News
| LOVD 3.0 build 30 released |
Ivo Fokkema, 2024-05-30 |
Today, LOVD 3.0 build 30 has been released.
New features implemented, amongst others:
Updated the VariantValidator library and now using VariantValidator to fetch transcript information;
Improved the connectivity debugging script;
Made all date fields publicly visible;
Added several improvements to the submission API;
Major improvements to the HGVS functions.
Removed features:
Removed the LRG functionality;
Removed the SeattleSeq feature.
Bugs fixed, amongst others:
Fixed bug in the checkHGVS script;
Fixed several notices and warnings occurring with unexpected input;
Fixed an incorrect table name in code handling the deletion of an individual;
Updated code to handle newer PHP versions;
Fixed various bugs in the mapper;
Fixed position matching in the LOVD2-style API;
Fixed broken links to Orphanet, they changed their URL structure;
Fixed variant page titles — the GENE(NM):c format is not valid.
Closes #639 and #645.
See the changelog.
Download the new build.
LOVD scripts included: LOVD2 file converter 3.0-29, Reading Frame Checker 3.0-28, RefSeqParser 3.0-29, Variant position fixer 3.0-29, Variant Validation 3.0-30.
Manual version included: May 30th, 2024. |
News older than 12 months can be found in the archive.
| Last modified 2024/05/30 21:59:29 CEST |
When using or discussing LOVD please refer to:
Fokkema IF, Kroon M, López Hernández JA, Asscheman D, Lugtenburg I, Hoogenboom J, den Dunnen JT.
The LOVD3 platform: efficient genome-wide sharing of genetic variants.
Eur J Hum Genet (2021).
https://doi.org/10.1038/s41431-021-00959-x.
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