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  Contents     1. Intro     2. Before installing     3. Installing     4. Managers     5. Curators     6. Public     7. Scripts     8. Use of HTML  

LOVD Manual

Index

1. Introduction
2. Before you install
     2.1. Download & Extract
     2.2. Relevant directory listing
     2.3. Pre-install Setup
3. Installing LOVD
4. Manager handbook
     4.1. System wide setup
          4.1.1. System settings
          4.1.2. Custom columns
          4.1.3. Custom links
     4.2. Gene specific setup
          4.2.1. Creating new genes
          4.2.2. Editing existing genes
          4.2.3. Deleting existing genes
     4.3. User management
          4.3.1. User levels
          4.3.2. Creating new users
          4.3.3. Editing existing users
          4.3.4. Deleting existing users
          4.3.5. Assigning curators to specific genes
     4.4. Uninstalling LOVD
5. Curator handbook
     5.1. Adding variants
          5.1.1. Importing textfiles
          5.1.2. Manually adding variants
     5.2. Finding variants
     5.3. Editing and curating variants
     5.4. Free Edit
6. The public area
     6.1. Selecting a gene
     6.2. Gene homepage
     6.3. The allelic variants
          6.3.1. Complete allelic variant table
          6.3.2. Summary tables
          6.3.3. Polymorphism table
          6.3.4. Searching specific variants
     6.4. Submitters
          6.4.1. Registering a new account
          6.4.2. Keeping your account up to date
          6.4.3. Submitting new variants
     6.5. LOVD status
7. LOVD scripts
     7.1. LOVD Reference Sequence Parser
8. Use of HTML within LOVD
Last modified 2014/08/25 14:48:45


When using or discussing LOVD please refer to:
Fokkema IFAC, Den Dunnen JT and Taschner PEM (2005). LOVD: easy creation of a locus-specific sequence variation database using an "LSDB-in-a-Box" approach.
Hum Mutat. 2005 Aug;26(2):63-8.

Leiden University Medical Center, Netherlands
Ing. Ivo F.A.C. Fokkema, Dr. Johan T. den Dunnen