LOVD 3.0 News

LOVD 3.0 build 25 released Ivo Fokkema, 2020-10-22
Today, LOVD 3.0 build 25 has been released.
New features implemented, amongst others: Added the possibility to download entire submissions; Improved the "forgot your password" feature; Added feature to merge entries (Individuals, Screenings); Improved page titles by adding details to them; Improved the submission API to allow variant-only submissions and to directly process submissions if configured to do so; Extended search capabilities by allowing searching for prefix or suffix; Added a link to MobiDetails, an annotation platform dedicated to the interpretation of DNA variants.
Bugs fixed, amongst others: Fixed link to the Ensembl and NCBI genome browsers; Fixed bug; The feature to map a variant to the genome didn't always work; Fixed incomplete grouping of variants in the unique variants view for large data sets.
Closes #435, #436, #437, #438, #439, #444, #448, #450, #452, #454, #455, #457, #460, #462, #464, #466, #469 and #471.

See the changelog.
Download the new build.
LOVD scripts included: LOVD2 file converter 3.0-22, Reading Frame Checker 3.0-22, RefSeqParser 3.0-22, Variant position fixer 3.0-20, Variant Validation 3.0-25.
Manual version included: October 12th, 2020.

LOVD 3.0 build 24 released Ivo Fokkema, 2020-07-13
Today, LOVD 3.0 build 24 has been released.
New features implemented, amongst others: Added new features to allow Curators and up to more quickly curate new data; APIs and views now sort transcripts based on the number of variants they contain; Several improvements to the submission API; Created a variant verification script using the Variant Validator service; Removed additional variant effect values that were added in 3.0-20 - they will be replaced by new clinical classification columns; Improved the "forgot my password" feature.
Bugs fixed, amongst others: The entered IP value to restrict an account was not validated when registering a new account; The JSON variant API wasn't selecting data properly; The registration spam filter rejected too many real registrations.
Closes #113, #225, #284, #420, #428, #430 and #432.

See the changelog.
Download the new build.
LOVD scripts included: LOVD2 file converter 3.0-22, Reading Frame Checker 3.0-22, RefSeqParser 3.0-22, Variant position fixer 3.0-20, Variant Validation 3.0-24.
Manual version included: July 13th, 2020.

LOVD 3.0 build 23 released Ivo Fokkema, 2020-02-19
Today, LOVD 3.0 build 23 has been released.
New features implemented, amongst others: Added some LOVD2 columns to the LOVD2 to LOVD3 converter script; Added timezone indicators to all printed timestamps in LOVD; Added public links to the genome browsers from the variant Options menu; Data owner information is now also shown on the data detailed views; Adding a disease or phenotype to an individual is now mandatory.
Bugs fixed, amongst others: Fixed potential XSS risks.

See the changelog.
Download the new build.
LOVD scripts included: LOVD2 file converter 3.0-22, Reading Frame Checker 3.0-22, RefSeqParser 3.0-22, Variant position fixer 3.0-20.
Manual version included: February 17th, 2020.

News older than 12 months can be found in the archive.

Last modified 2020/10/22 16:15:45 CEST

When using or discussing LOVD please refer to:
Fokkema IF, Taschner PE, Schaafsma GC, Celli J, Laros JF, den Dunnen JT (2011). LOVD v.2.0: the next generation in gene variant databases. Hum Mutat. 2011 May;32(5):557-63.

A recommended system of the Human Variome Project LOVD has received funding from the European Community's Seventh Framework Programme
(FP7/2007-2013) under grant agreement nº 200754 - the GEN2PHEN project.
©2004-2021 Leiden University Medical Center, Netherlands
Ivo F.A.C. Fokkema BSc., Prof. Johan T. den Dunnen PhD
A IRDiRC recognized resource