|
LOVD v.3.0 - Leiden Open Variation Database
Online gene-centered collection and display of DNA variants
|
|
List of public LOVD installations
 |
If you are looking for a specific gene database, please also check our list of LSDBs. |
Please note that the latest available build is always installed on our Leiden server. We offer free use of this LOVD installation for those interested, e.g. to maintain/start a LSDB. Contact us for more information.
You can also download this list to see the complete list of genes in the databases.
| In total: 4,625,821 variants in 1,790,120 individuals in 19 LOVD installations. |
| https://databases.lovd.nl/shared/ |
LOVD 3.0-29 |
23033 genes |
2392648 variants |
| Global Variome shared LOVD |
A1BG,A1BG-AS1,A1CF,A2LD1,A2M,A2M-AS1,A2ML1,A2MP1,A3GALT2,... |
402862 unique |
| https://databases.lovd.nl/whole_genome/ |
LOVD 3.0-20a |
22002 genes |
1998175 variants |
| Whole genome datasets |
A1BG,A1BG-AS1,A1CF,A2M,A2M-AS1,A2ML1,A2MP1,A4GALT,A4GNT,A... |
1998135 unique |
| https://ab-openlab.csir.res.in/mitolsdb/ |
LOVD 2.0-35 |
37 genes |
112662 variants |
| MitoLSDB |
MTATP6,MTATP8,MTCO1,MTCO2,MTCO3,MTCYB,MTND1,MTND2,MTND3,M... |
4660 unique |
| http://ithaka.rrp.demokritos.gr/CanVaS/ |
LOVD 3.0-23 |
98 genes |
36951 variants |
| CanVaS - A Greek Cancer Patient Genetic Variation Resource |
AIP,ALK,APC,ATM,BAP1,BARD1,BLM,BMPR1A,BRCA1,BRCA2,BRIP1,B... |
8213 unique |
| https://mseqdr.org/MITO/ |
LOVD 3.0-21 |
1628 genes |
28676 variants |
| MSeqDR-LSDB Mitochondrial Disease Locus Specific Database |
AADAT,AARS2,AASS,ABAT,ABCA13,ABCA9,ABCB10,ABCB6,ABCB7,ABC... |
26354 unique |
| http://HCI-LOVD.hci.utah.edu |
LOVD 2.0-33 |
8 genes |
26167 variants |
| LOVD - human mismatch repair genes |
MLH1,MLH1_priors,MSH2,MSH2_priors,MSH6,MSH6_priors,PMS2,P... |
26167 unique |
| http://www.inc.gob.ar/sither/ |
LOVD 3.0-29 |
104 genes |
9318 variants |
| sither |
AIP,AKT1,ALK,APC,ASS1,ATM,AXIN2,BAP1,BARD1,BLM,BMPR1A,BRC... |
1533 unique |
| http://sysbio.org.cn/NDDVD/ |
LOVD 3.0-29 |
233 genes |
6320 variants |
| NDDVD - Neurodegenerative Diseases Variation Database |
ABCA7,ADCY5,ADORA1,AFG3L2,AGBL3,ALS2,ANG,APEX1,APOA1,APOE... |
4848 unique |
| http://rb1-lovd.d-lohmann.de/ |
LOVD 2.0-34 |
1 gene |
3438 variants |
| rb1-lsdb |
RB1 |
1770 unique |
| http://databases.lovd.nl/DNA_profiles/ |
LOVD 3.0-27 |
0 genes |
3414 variants |
| LOVD - Leiden Open Variation Database |
|
667 unique |
| https://myhvpdb.kk.usm.my/ |
LOVD 3.0-29 |
311 genes |
3072 variants |
| Malaysian Node of the Human Variome Project Database |
ABCA1,ABCA12,ABCA5,ABCB1,ABCC2,ABCD1,ABCG8,ABL1,ACE,ADAM2... |
1602 unique |
| http://hci-exlovd.hci.utah.edu/ |
LOVD 2.0-22 |
3 genes |
1822 variants |
| Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified using a quantit |
BRCA1,BRCA1fx,BRCA2 |
1850 unique |
| http://hgddatabase.cvtisr.sk/ |
LOVD 2.0-38 |
1 gene |
1443 variants |
| HGD mutation database |
HGD |
258 unique |
| https://coppolalab.ucla.edu/lovd_gift/ |
LOVD 3.0-21 |
11 genes |
634 variants |
| Coppola Lab - GIFT Variant Database |
APP,C9orf72,CHMP2B,FUS,GRN,MAPT,PSEN1,PSEN2,TARDBP,TBK1,VCP |
585 unique |
| https://lshg-lovd.labor-staber.de/LOVD/LOVDv.3.0/ |
LOVD 3.0-29 |
102 genes |
440 variants |
| Labor Staber Humangenetik |
ABCC8,ABCC9,ADA2,AIP,APC,APOB,APPL1,ATM,ATP7B,ATXN3,BAP1,... |
428 unique |
| http://www.dbagenes.unito.it/ |
LOVD 2.0-38 |
13 genes |
399 variants |
| Diamond-Blackfan Anemia |
GATA1,RPL11,RPL15,RPL26,RPL31,RPL35A,RPL5,RPS10,RPS17,RPS... |
256 unique |
| https://lovd3.isciii.es/ |
LOVD 3.0-27 |
31 genes |
188 variants |
| SpainMDB |
ABCD1,APC,ATP7B,BRAF,BRCA1,BRCA2,BSND,CFTR,CYP27A1,DMD,GH... |
137 unique |
| http://www.icp.ucl.ac.be/vikkula/CLPdb/ |
LOVD 2.0-36 |
1 gene |
54 variants |
| Cleft Lip and Palate Mutation Database |
IRF6 |
44 unique |
| http://l3.d-lohmann.de/ |
LOVD 3.0-18 |
1 gene |
0 variants |
| Essen-Eye-Cancer-Genetics |
RB1 |
0 unique |
(This list is updated daily and shows LOVD 2.0 and 3.0 installations active for the last three months that have the "include in the global LOVD listing" setting enabled. Please allow one day for changes to take effect.)
| Last modified 2021/01/14 10:17:48 CET |
When using or discussing LOVD please refer to:
Fokkema IF, Kroon M, López Hernández JA, Asscheman D, Lugtenburg I, Hoogenboom J, den Dunnen JT.
The LOVD3 platform: efficient genome-wide sharing of genetic variants.
Eur J Hum Genet (2021).
https://doi.org/10.1038/s41431-021-00959-x.
|
|
